Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO56_04445 | P30864 | Negative | 5869861 - 5870757 | 33396.0 |
| nadh quinone dehydrogenase mdab | ALO56_04446 | P0AEY7 | Negative | 5871089 - 5871721 | 23570.9 |
| uncharacterized protein | ALO56_04447 | Not Available | Negative | 5872154 - 5872954 | 27995.8 |
| lysr family transcriptional regulator | ALO56_00565 | Q47141 | Positive | 5873018 - 5873899 | 32102.8 |
| trna 2-selenouridine synthase | ALO56_04448 | Q48NL9 | Negative | 5874239 - 5875348 | 41701.8 |
| phosphonate abc transporter, periplasmic phosphonate-binding protein | ALO56_100100 | A3PC74 | Positive | 5876348 - 5877466 | 40540.8 |
| phosphonates import atp-binding protein phnc | ALO56_100130 | Q889G0 | Positive | 5877463 - 5878263 | 28699.0 |
| phosphonate abc transporter, inner membrane subunit | ALO56_100178 | O69053 | Positive | 5879081 - 5879848 | 27118.8 |
| gamma-glutamyltransferase | ALO56_04449 | P36267 | Negative | 5880090 - 5881937 | 65683.7 |
| dna-binding response regulator | ALO56_04450 | P31079 | Positive | 5881949 - 5882845 | 33733.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









