Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd/tolr | ALO56_03261 | Not Available | Positive | 536952 - 537398 | 15837.3 |
| multidrug efflux rnd transporter, membrane fusion protein mexe | ALO56_03262 | Q8FWV8 | Positive | 538534 - 539775 | 44477.0 |
| multidrug efflux rnd transporter mexf | ALO56_03263 | Q8G2M6 | Positive | 539788 - 542979 | 115330.0 |
| outer membrane efflux protein | ALO56_03264 | Not Available | Positive | 542979 - 544376 | 50263.3 |
| tpr repeat-containing protein | ALO56_03265 | Not Available | Positive | 544499 - 545596 | 39985.7 |
| transcriptional regulator | ALO56_03266 | Not Available | Positive | 546080 - 546442 | 13422.1 |
| uncharacterized protein | ALO56_05011 | Not Available | Negative | 546931 - 547581 | 23619.5 |
| lactoylglutathione lyase | ALO56_03268 | P16635 | Positive | 547625 - 548158 | 19892.6 |
| alkyl hydroperoxide reductase subunit f | ALO56_05012 | P0A155 | Negative | 548223 - 549869 | 58691.7 |
| alkyl hydroperoxide reductase protein | ALO56_03270 | P0A252 | Negative | 549918 - 550481 | 20516.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









