Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate assembly protein w | ALO56_00231 | Not Available | Negative | 5485283 - 5485609 | 12096.7 |
| uncharacterized protein | ALO56_00232 | Not Available | Negative | 5485614 - 5485874 | 9263.81 |
| Phage baseplate assembly protein | ALO56_00233 | Not Available | Negative | 5485917 - 5486501 | 20415.9 |
| Putative minor tail protein | ALO56_00234 | Not Available | Negative | 5486498 - 5487028 | 19577.9 |
| Hypothetical protein | ALO56_00235 | Not Available | Negative | 5487021 - 5487677 | 24514.4 |
| uncharacterized protein | ALO56_00236 | Not Available | Negative | 5487674 - 5487988 | 11449.8 |
| Major capsid protein | ALO56_00237 | Not Available | Negative | 5487991 - 5488986 | 36206.1 |
| Head decoration protein d | ALO56_00238 | Not Available | Negative | 5489075 - 5489419 | 11946.3 |
| Head maturation protease | ALO56_00239 | Not Available | Negative | 5489416 - 5490546 | 40210.1 |
| Portal protein | ALO56_00240 | O64319 | Negative | 5490543 - 5492024 | 55280.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









