Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | ALO56_04937 | Q02KR1 | Negative | 5858093 - 5860609 | 91072.3 |
| putative phosphoenolpyruvate synthase regulatory protein | ALO56_02832 | Q883Q9 | Positive | 5860661 - 5861479 | 30989.8 |
| membrane protein | ALO56_00555 | Not Available | Positive | 5861722 - 5863008 | 45498.8 |
| zinc metallopeptidase | ALO56_00556 | P64431 | Positive | 5863201 - 5864091 | 31855.3 |
| uncharacterized protein | ALO56_00557 | Not Available | Positive | 5864096 - 5865085 | 36738.2 |
| had family hydrolase | ALO56_00558 | Q8RYE9 | Negative | 5865321 - 5865911 | 21500.0 |
| acyl-coa thioesterase ii | ALO56_00559 | P0AGG3 | Negative | 5865908 - 5866783 | 32973.9 |
| gnat family acetyltransferase | ALO56_00560 | Not Available | Negative | 5866901 - 5867470 | 21363.8 |
| histone deacetylase family protein | ALO56_100620 | P28606 | Positive | 5867886 - 5868506 | 22745.1 |
| uncharacterized protein | ALO56_00561 | Not Available | Positive | 5868534 - 5869811 | 45868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









