Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| assimilatory nitrate reductase electron transfer subunit domain protein | ALO56_02823 | P42435 | Positive | 5847556 - 5848785 | 44423.7 |
| assimilatory nitrate reductase large subunit | ALO56_100141 | P39458 | Positive | 5848776 - 5851502 | 99333.9 |
| uroporphyrin-iii c-methyltransferase | ALO56_02824 | P37725 | Positive | 5851513 - 5852274 | 26821.7 |
| oprf | ALO56_02825 | Not Available | Negative | 5852375 - 5853409 | 36551.0 |
| rna polymerase sigma factor sigx | ALO56_02826 | Not Available | Negative | 5853517 - 5854044 | 20832.3 |
| uncharacterized protein | ALO56_02827 | Not Available | Negative | 5854190 - 5855020 | 29155.7 |
| crfx protein | ALO56_100028 | Not Available | Negative | 5855017 - 5855277 | 9253.99 |
| cmax protein | ALO56_04936 | C6DJ80 | Negative | 5855353 - 5856348 | 38009.6 |
| ribonuclease activity regulator protein rraa | ALO56_02829 | Q4ZUN7 | Negative | 5856360 - 5856848 | 17401.0 |
| esterase | ALO56_02830 | Not Available | Negative | 5856939 - 5857925 | 36300.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









