Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | ALO56_01609 | P77434 | Positive | 5831401 - 5832669 | 46817.7 |
| chase domain-containing protein/sensory box histidine kinase | ALO56_02815 | Not Available | Negative | 5833010 - 5835382 | 88378.0 |
| ribosomal rna large subunit methyltransferase k/l | ALO56_04930 | Q4ZUM1 | Negative | 5835521 - 5837944 | 90844.5 |
| ribosome modulation factor | ALO56_100219 | Q48JX9 | Positive | 5838366 - 5838581 | 8192.81 |
| dihydroorotate dehydrogenase | ALO56_04931 | Q48JY0 | Negative | 5838723 - 5839829 | 38945.3 |
| uncharacterized protein | ALO56_04932 | P73452 | Positive | 5839847 - 5841217 | 50076.4 |
| response regulator receiver:antar | ALO56_02819 | Not Available | Positive | 5841226 - 5841807 | 21870.9 |
| levansucrase | ALO56_02820 | O52408 | Negative | 5841943 - 5843232 | 47654.1 |
| nitrate transporter | ALO56_02821 | P42432 | Positive | 5844385 - 5845596 | 42567.6 |
| serine/threonine protein kinase | ALO56_02822 | P9WI62 | Positive | 5845604 - 5847265 | 61594.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









