Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| renal dipeptidase family protein | ALO56_01600 | E9CV02 | Positive | 5816064 - 5817104 | 38216.0 |
| hnob domain protein | ALO56_100011 | Not Available | Positive | 5816588 - 5817718 | 43110.9 |
| nadh:flavin oxidoreductase | ALO56_01601 | O87278 | Positive | 5817734 - 5819794 | 75571.8 |
| 4fe-4s ferredoxin | ALO56_01602 | P45866 | Positive | 5820043 - 5822007 | 71355.0 |
| electron transfer flavoprotein subunit alpha | ALO56_01603 | P71153 | Positive | 5822007 - 5823227 | 43262.7 |
| chitinase | ALO56_01604 | Q838S2 | Negative | 5824667 - 5826448 | 66754.2 |
| rieske protein | ALO56_01605 | P0ABR8 | Negative | 5826673 - 5827971 | 49068.6 |
| ferredoxin:oxidoreductase fad/nad-binding subunit | ALO56_01606 | Q9RC40 | Positive | 5828277 - 5829383 | 40802.0 |
| threonine aldolase | ALO56_01607 | O50584 | Negative | 5829405 - 5830445 | 38080.9 |
| trax family protein | ALO56_01608 | Not Available | Positive | 5830542 - 5831288 | 27774.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









