Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidase | ALO56_03652 | Q50228 | Positive | 5806412 - 5807641 | 44573.9 |
| regulatory protein | ALO56_03653 | Not Available | Positive | 5807721 - 5808068 | 12343.8 |
| putative sensory protein | ALO56_03654 | P17057 | Positive | 5808315 - 5808755 | 16324.7 |
| glutathione s-transferase | ALO56_03655 | Q9P6M1 | Negative | 5808808 - 5809434 | 23317.0 |
| sensory box histidine kinase/response regulator | ALO56_05100 | Not Available | Negative | 5809586 - 5812126 | 93238.2 |
| methyl-accepting chemotaxis protein | ALO56_03657 | Not Available | Positive | 5812437 - 5814365 | 68066.1 |
| Trna-ala | Not Available | Not Available | Positive | 5814561 - 5814636 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5814681 - 5814757 | Not Available |
| uncharacterized protein | ALO56_01598 | Not Available | Negative | 5815015 - 5815434 | 14964.0 |
| uncharacterized protein | ALO56_01599 | Not Available | Negative | 5815489 - 5815899 | 15018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









