Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03643 | Q9I068 | Negative | 5793108 - 5793545 | 15376.3 |
| membrane protein | ALO56_03644 | Not Available | Positive | 5795489 - 5796442 | 35001.2 |
| uncharacterized protein | ALO56_03645 | Not Available | Negative | 5796482 - 5796721 | 8945.76 |
| luxr family dna-binding response regulator | ALO56_03646 | Q9HV27 | Negative | 5796886 - 5797557 | 24330.4 |
| sensor histidine kinase/response regulator | ALO56_05096 | Not Available | Negative | 5797532 - 5800942 | 125762.0 |
| branched-chain amino acid abc transporter substrate-binding protein | ALO56_03647 | Not Available | Positive | 5801438 - 5802682 | 44974.6 |
| branched-chain amino acid abc transporter permease | ALO56_03648 | Q58665 | Positive | 5802766 - 5803698 | 33646.0 |
| branched-chain amino acid abc transporter permease | ALO56_03649 | Not Available | Positive | 5803709 - 5804872 | 42018.6 |
| branched-chain amino acid abc transporter atp-binding protein | ALO56_03650 | P0A194 | Positive | 5804869 - 5805630 | 28028.0 |
| branched-chain amino acid abc transporter atp-binding protein | ALO56_03651 | P0A192 | Positive | 5805641 - 5806330 | 25155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









