Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, tetr | ALO56_03634 | Not Available | Positive | 5777206 - 5777820 | 22749.3 |
| secretion protein hlyd | ALO56_03635 | Not Available | Positive | 5777895 - 5779001 | 37800.2 |
| acriflavin resistance protein | ALO56_03636 | P24181 | Positive | 5778998 - 5782108 | 112999.0 |
| 3-oxoacyl- synthase 2 | ALO56_03637 | P56902 | Positive | 5782111 - 5783391 | 44176.5 |
| histidine kinase, hamp region:bacterial chemotaxis sensory transducer | ALO56_100225 | Not Available | Positive | 5785148 - 5786809 | 59457.7 |
| unknown protein sequence | ALO56_03638 | Not Available | Positive | 5788235 - 5788432 | 7243.65 |
| tetr family transcriptional regulator | ALO56_03639 | P75952 | Negative | 5788965 - 5789591 | 22651.1 |
| major facilitator family transporter | ALO56_03640 | Not Available | Positive | 5789701 - 5790906 | 41937.2 |
| uncharacterized protein | ALO56_03641 | Not Available | Positive | 5792113 - 5792592 | 17815.2 |
| uncharacterized protein | ALO56_03642 | Not Available | Negative | 5792641 - 5792937 | 11443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









