Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease tatd | ALO56_01902 | D4GGR2 | Positive | 5765125 - 5765961 | 31106.9 |
| methyl-accepting chemotaxis protein | ALO56_01903 | Q9Z429 | Positive | 5766046 - 5767350 | 46478.4 |
| uncharacterized protein | ALO56_01904 | Not Available | Positive | 5767468 - 5767830 | 13766.8 |
| acyl-coa thioesterase ii | ALO56_01905 | Not Available | Negative | 5768077 - 5768874 | 28692.5 |
| chad domain-containing superfamily protein | ALO56_04749 | Not Available | Negative | 5769010 - 5770101 | 40513.6 |
| transglutaminase | ALO56_04750 | Q9HZX3 | Negative | 5769791 - 5771830 | 76279.2 |
| uncharacterized protein | ALO56_01908 | Not Available | Negative | 5771791 - 5772747 | 35483.2 |
| moxr protein | ALO56_01909 | P94474 | Negative | 5772744 - 5773661 | 33117.3 |
| lipoprotein | ALO56_01910 | Not Available | Negative | 5773860 - 5774138 | 10070.0 |
| outer membrane component of tripartitemultidrug resistance system | ALO56_100745 | Q9KJC1 | Negative | 5775687 - 5777151 | 51771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









