Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major outer membrane lipoprotein | ALO56_01891 | P11221 | Positive | 5755329 - 5755580 | 8813.3 |
| erfk/ybis/ycfs/ynhg family protein | ALO56_04745 | P40680 | Negative | 5756077 - 5757132 | 37512.4 |
| uncharacterized protein | ALO56_01893 | Not Available | Negative | 5757145 - 5757426 | 10602.0 |
| arylesterase | ALO56_04746 | Q9HZY8 | Negative | 5757483 - 5758517 | 37449.4 |
| permease | ALO56_01896 | P77504 | Positive | 5758782 - 5761298 | 89447.1 |
| transcription elongation factor greb | ALO56_01897 | Q883T5 | Negative | 5761484 - 5761957 | 18664.1 |
| uncharacterized protein | ALO56_01898 | Not Available | Negative | 5762005 - 5762334 | 12249.8 |
| uncharacterized protein | ALO56_01899 | Not Available | Negative | 5762415 - 5762723 | 11517.0 |
| doxd-like family protein | ALO56_01900 | P96694 | Negative | 5762968 - 5763417 | 15451.4 |
| transglycosylase | ALO56_01901 | Not Available | Negative | 5763514 - 5764950 | 53027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









