Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xenobiotic compound monooxygenase, dsza family protein | ALO56_01160 | E9JFX9 | Positive | 5745858 - 5747258 | 52116.5 |
| phosphoserine phosphatase | ALO56_01883 | Q883R9 | Negative | 5747501 - 5748139 | 24350.4 |
| phosphoadenosine phosphosulfate reductase | ALO56_01884 | B7VBC3 | Positive | 5748293 - 5749027 | 28087.4 |
| transcriptional regulator cysb | ALO56_04743 | P06614 | Negative | 5749097 - 5750071 | 36290.9 |
| universal stress protein | ALO56_01886 | Not Available | Negative | 5750232 - 5750726 | 18275.1 |
| 5'-nucleotidase | ALO56_01887 | Q9BXI3 | Negative | 5750818 - 5751723 | 32994.0 |
| 2-dehydropantoate 2-reductase | ALO56_04744 | Q8YX96 | Negative | 5751742 - 5752758 | 36504.0 |
| lipoprotein | ALO56_01889 | Not Available | Negative | 5752724 - 5753059 | 12104.5 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | ALO56_100077 | P0A1B6 | Positive | 5753077 - 5754369 | 47104.4 |
| uncharacterized protein | ALO56_01890 | Not Available | Negative | 5754441 - 5754722 | 10657.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









