Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner-membrane translocator | ALO56_01151 | P36948 | Positive | 5735296 - 5736282 | 33766.2 |
| acyl-coa dehydrogenase | ALO56_04576 | Not Available | Negative | 5736292 - 5737614 | 47915.3 |
| uncharacterized protein | ALO56_01153 | Not Available | Positive | 5737735 - 5738907 | 43085.6 |
| branched-chain amino acid abc transporter, atp-binding protein | ALO56_01154 | Not Available | Positive | 5738904 - 5739698 | 29105.3 |
| branched-chain amino acid abc transporter permease | ALO56_01155 | Not Available | Positive | 5739859 - 5740740 | 31085.4 |
| putative branched-chain amino acid abc transporter permease | ALO56_01156 | Not Available | Positive | 5740762 - 5741829 | 38596.1 |
| uncharacterized protein | ALO56_01157 | Not Available | Positive | 5741896 - 5743227 | 48085.2 |
| branched-chain amino acid abc transporter atp-binding protein | ALO56_01158 | Not Available | Positive | 5743232 - 5744008 | 28030.9 |
| acyl-coa dehydrogenase | ALO56_100041 | Not Available | Positive | 5744156 - 5745397 | 44886.4 |
| uncharacterized protein | ALO56_01159 | Not Available | Positive | 5745413 - 5745853 | 16133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









