Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01141 | Not Available | Negative | 5724679 - 5725005 | 11809.0 |
| uncharacterized protein | ALO56_01142 | Q55946 | Negative | 5725007 - 5725966 | 33974.5 |
| uncharacterized protein | ALO56_01143 | Not Available | Negative | 5726028 - 5726588 | 21283.6 |
| uncharacterized protein | ALO56_01144 | Not Available | Negative | 5726608 - 5727765 | 41193.3 |
| uncharacterized protein | ALO56_01145 | Q6RWG0 | Negative | 5727758 - 5728711 | 34727.5 |
| uncharacterized protein | ALO56_01146 | Not Available | Negative | 5728852 - 5729334 | 17816.8 |
| fis family transcriptional regulator | ALO56_01147 | E1WAA4 | Positive | 5729570 - 5731507 | 72256.5 |
| ribose abc transporter, periplasmic ribose-binding protein | ALO56_01148 | Not Available | Positive | 5731734 - 5732738 | 35940.2 |
| ribose abc transporter, atp-binding protein | ALO56_01149 | Q88J90 | Positive | 5732746 - 5734308 | 56377.4 |
| inner-membrane translocator | ALO56_01150 | Not Available | Positive | 5734295 - 5735299 | 34064.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









