Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase | ALO56_01131 | Q69TH8 | Positive | 5711111 - 5712214 | 40205.4 |
| uncharacterized protein | ALO56_01132 | Q2RIW8 | Negative | 5712260 - 5713339 | 39557.1 |
| transporter periplasmic protein | ALO56_01133 | P49308 | Negative | 5713531 - 5714457 | 33489.4 |
| hydroxypyruvate isomerase | ALO56_01134 | Q7T3H9 | Negative | 5714525 - 5715313 | 28400.9 |
| oxidoreductase | ALO56_01135 | O05389 | Negative | 5715310 - 5716332 | 36180.2 |
| sigma-54 dependent transcriptional regulator | ALO56_01136 | P26047 | Positive | 5716524 - 5718515 | 72238.6 |
| oxidoreductase alpha subunit | ALO56_01137 | Not Available | Negative | 5718543 - 5720954 | 88561.5 |
| virk | ALO56_01138 | P55686 | Negative | 5721051 - 5721479 | 15370.3 |
| methyl-accepting chemotaxis protein | ALO56_01139 | Not Available | Positive | 5721715 - 5723349 | 58278.2 |
| monooxygenase fad-binding protein | ALO56_01140 | Q5L2G3 | Negative | 5723418 - 5724650 | 45276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









