Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | ALO56_04574 | Q8FW84 | Negative | 5701538 - 5703451 | 72021.5 |
| ppic-type peptidyl-prolyl cis-trans isomerase | ALO56_01124 | C5D6L9 | Negative | 5703555 - 5703836 | 9916.66 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ALO56_01125 | P00888 | Negative | 5703920 - 5705002 | 38938.6 |
| phage-associated protein, bcepmu gp16 family | ALO56_100053 | Not Available | Negative | 5705690 - 5705920 | 8160.74 |
| putative dna-binding protein | ALO56_01126 | Not Available | Positive | 5706003 - 5706362 | 12867.2 |
| luxr response regulator receiver | ALO56_01127 | P95582 | Positive | 5706662 - 5707249 | 21245.1 |
| uvrabc system protein c | ALO56_01128 | Q880X7 | Positive | 5707252 - 5709075 | 67123.5 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ALO56_01129 | P45419 | Positive | 5709102 - 5709668 | 20805.2 |
| Trna-gly | Not Available | Not Available | Positive | 5709735 - 5709810 | Not Available |
| regulatory protein lysr | ALO56_01130 | P76250 | Negative | 5710093 - 5710779 | 24623.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









