Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| knr4-like cell wall assembly/cell proliferation coordinating protein | ALO56_01103 | Not Available | Negative | 5671889 - 5672482 | 22154.0 |
| uncharacterized protein | ALO56_01104 | Not Available | Positive | 5672832 - 5673386 | 19512.7 |
| uncharacterized protein | ALO56_01105 | Not Available | Positive | 5674496 - 5675296 | 30149.8 |
| dna helicase-like protein | ALO56_01106 | P52126 | Positive | 5675298 - 5677763 | 94113.9 |
| uncharacterized protein | ALO56_01107 | Not Available | Negative | 5678258 - 5678866 | 21432.1 |
| uncharacterized protein | ALO56_01108 | Not Available | Negative | 5678863 - 5680098 | 46372.6 |
| putative radical sam protein | ALO56_05245 | Not Available | Negative | 5680098 - 5681735 | 61265.9 |
| transcriptional regulator mext | ALO56_01110 | Not Available | Negative | 5682226 - 5683221 | 36837.5 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO56_01111 | O53901 | Positive | 5683459 - 5684481 | 36981.3 |
| uncharacterized protein | ALO56_01112 | Not Available | Positive | 5685176 - 5686678 | 55401.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









