Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | ALO56_02112 | B2CML6 | Positive | 5648840 - 5650153 | 47470.5 |
| acyl-coa dehydrogenase family protein | ALO56_02113 | Q845S8 | Positive | 5650179 - 5651384 | 43522.1 |
| dsza family monooxygenase | ALO56_02114 | A4IU28 | Positive | 5651384 - 5652745 | 50873.8 |
| d-methionine-binding lipoprotein metq | ALO56_02115 | Q8X8V9 | Positive | 5652877 - 5653665 | 28340.1 |
| methionine import atp-binding protein metn | ALO56_02116 | Q87UV4 | Positive | 5653662 - 5654792 | 41381.2 |
| d-methionine abc transporter permease | ALO56_02117 | Q9KTJ6 | Positive | 5654782 - 5655426 | 23057.0 |
| uncharacterized protein | ALO56_02118 | Not Available | Positive | 5655469 - 5656098 | 23699.0 |
| tetr family transcriptional regulator | ALO56_01091 | Not Available | Positive | 5656501 - 5657088 | 21428.5 |
| uncharacterized protein | ALO56_01092 | Not Available | Positive | 5657292 - 5658071 | 28597.1 |
| cationic amino acid abc transporter periplasmic amino acid binding protein | ALO56_01093 | P09551 | Negative | 5659541 - 5660326 | 28590.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









