Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsr1-like gtp-binding protein | ALO56_01527 | Not Available | Negative | 5637803 - 5639191 | 50559.8 |
| uncharacterized protein | ALO56_01528 | Not Available | Negative | 5639184 - 5640563 | 50642.9 |
| hypothetical protein | ALO56_01529 | P12833 | Positive | 5640673 - 5641185 | 18976.6 |
| uncharacterized protein | ALO56_01530 | Q9HTR2 | Positive | 5641367 - 5642425 | 39559.8 |
| serine o-acetyltransferase | ALO56_02107 | Q59967 | Negative | 5642641 - 5643594 | 34412.0 |
| d-cysteine desulfhydrase | ALO56_02108 | A8GFZ8 | Positive | 5643809 - 5644807 | 35394.5 |
| cystine transporter subunit | ALO56_02109 | P0AEN0 | Positive | 5644894 - 5645814 | 33424.1 |
| amino acid abc transporter permease | ALO56_02110 | Not Available | Positive | 5645811 - 5646479 | 24614.6 |
| amino-acid abc transporter atp-binding protein yecc | ALO56_02111 | P37774 | Positive | 5646483 - 5647226 | 27187.2 |
| hypothetical protein | ALO56_100158 | Not Available | Positive | 5647746 - 5648528 | 28491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









