Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase heme-binding subunit yedz | ALO56_01090 | Q888N1 | Positive | 5627957 - 5628577 | 23268.9 |
| hypothetical protein | ALO56_200224 | Not Available | Positive | 5628633 - 5628836 | 7236.44 |
| sporulation related protein | ALO56_00644 | Not Available | Negative | 5629002 - 5629697 | 24569.8 |
| arginine--trna ligase | ALO56_00645 | Q48PI2 | Negative | 5629699 - 5630160 | 17024.3 |
| uncharacterized protein | ALO56_05250 | Not Available | Positive | 5630373 - 5631680 | 46856.1 |
| primosome assembly protein pria | ALO56_01523 | P17888 | Negative | 5631736 - 5633955 | 82062.2 |
| 50s ribosomal protein l31 | ALO56_01524 | Q87V05 | Positive | 5634121 - 5634342 | 7880.49 |
| nuclease | ALO56_04674 | Not Available | Positive | 5634356 - 5635150 | 28896.0 |
| malic enzyme family protein | ALO56_01525 | E1V8J1 | Positive | 5635334 - 5636602 | 45251.8 |
| hypothetical protein | ALO56_01526 | Not Available | Negative | 5636743 - 5637735 | 37438.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









