Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | ALO56_01740 | P42720 | Negative | 509406 - 509756 | 12862.4 |
| syringafactin synthetase syfb | ALO56_100726 | Not Available | Positive | 509758 - 514965 | 187943.0 |
| syringafactin efflux protein syfc | ALO56_04738 | P64176 | Positive | 515060 - 516235 | 42468.8 |
| macrolide export atp-binding/permease protein macb | ALO56_01860 | Q881Q1 | Positive | 516237 - 518246 | 72769.7 |
| regulatory protein luxr | ALO56_01861 | Not Available | Negative | 518221 - 518931 | 26382.7 |
| uncharacterized protein | ALO56_04631 | Not Available | Positive | 520745 - 521097 | 12974.4 |
| carbon-phosphorus lyase complex subunit phni | ALO56_03390 | P16687 | Positive | 521194 - 522129 | 34455.0 |
| phnj protein | ALO56_100145 | P16688 | Positive | 522126 - 522998 | 32522.7 |
| phosphonate c-p lyase system protein phnk | ALO56_03391 | P16678 | Positive | 522995 - 523816 | 30012.2 |
| abc transporter | ALO56_03392 | P16679 | Positive | 523830 - 524555 | 26715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









