Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04569 | Not Available | Negative | 5616677 - 5618215 | 56752.6 |
| penicillin-binding protein 1b | ALO56_04568 | Q9KUC0 | Positive | 5618347 - 5620668 | 84994.9 |
| uncharacterized protein | ALO56_01082 | Not Available | Positive | 5620685 - 5621425 | 25203.3 |
| trna pseudouridine synthase c | ALO56_01083 | Not Available | Positive | 5621425 - 5621754 | 12692.4 |
| uncharacterized protein | ALO56_01084 | Not Available | Negative | 5621766 - 5622194 | 15762.4 |
| acetolactate synthase 3 catalytic subunit | ALO56_01085 | P00893 | Positive | 5622585 - 5624318 | 62943.4 |
| acetolactate synthase 3 regulatory subunit | ALO56_01086 | P21622 | Positive | 5624321 - 5624812 | 17755.5 |
| ketol-acid reductoisomerase | ALO56_01087 | Q48N66 | Positive | 5624859 - 5625875 | 36328.5 |
| putative phosphatidyltransferase | ALO56_04571 | Q48269 | Positive | 5625954 - 5626880 | 33207.5 |
| sulfoxide reductase catalytic subunit yedy | ALO56_01089 | Q888N2 | Positive | 5626944 - 5627957 | 37901.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









