Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | ALO56_01072 | P14375 | Negative | 5605342 - 5606775 | 52388.7 |
| sensor histidine kinase | ALO56_01073 | P16497 | Negative | 5606798 - 5609752 | 108173.0 |
| uncharacterized protein | ALO56_01074 | Not Available | Negative | 5609736 - 5609912 | 6951.71 |
| glutamyl-q trna synthetase | ALO56_04566 | Q4ZY80 | Negative | 5610011 - 5611039 | 38791.1 |
| rna polymerase-binding transcription factor dksa | ALO56_01076 | P0ABS3 | Negative | 5611055 - 5611495 | 17054.3 |
| uncharacterized protein | ALO56_01077 | P96847 | Positive | 5611845 - 5613017 | 42862.0 |
| sugar fermentation stimulation protein -like protein | ALO56_01078 | Q48N77 | Positive | 5613017 - 5613730 | 26412.7 |
| iron-sulfur cluster-binding protein, rieske family | ALO56_01079 | Not Available | Negative | 5613751 - 5614107 | 13318.7 |
| deoxyribose-phosphate aldolase | ALO56_01080 | Q0SX30 | Positive | 5615127 - 5615900 | 27540.1 |
| pentapeptide repeat-containing protein | ALO56_01081 | Not Available | Negative | 5616236 - 5616580 | 12805.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









