Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | ALO56_01063 | Q9I2A8 | Negative | 5594321 - 5595514 | 40914.7 |
| uncharacterized protein | ALO56_01064 | Not Available | Negative | 5595629 - 5596495 | 31896.6 |
| acetyl-coenzyme a synthetase | ALO56_01065 | Q9HV66 | Negative | 5596548 - 5598485 | 71484.8 |
| glucose-6-phosphate isomerase | ALO56_01066 | Q48N88 | Negative | 5598618 - 5600282 | 61520.2 |
| aspartate 1-decarboxylase | ALO56_01067 | Q848I5 | Negative | 5600468 - 5600848 | 14111.8 |
| pantothenate synthetase | ALO56_01068 | Q48N87 | Negative | 5600856 - 5601707 | 30709.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ALO56_01069 | Q888Q5 | Negative | 5601704 - 5602504 | 28069.4 |
| hypothetical protein | ALO56_100631 | Not Available | Positive | 5602548 - 5602670 | 4772.86 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | ALO56_01070 | Q9HV71 | Negative | 5602737 - 5603243 | 18479.3 |
| poly polymerase i | ALO56_04563 | Q8ZRQ8 | Negative | 5603236 - 5604711 | 56368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









