Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01047 | P95453 | Negative | 5572839 - 5573147 | 11426.2 |
| ribosomal rna large subunit methyltransferase e | ALO56_01048 | Q87WP7 | Positive | 5573252 - 5573902 | 24100.1 |
| atp-dependent zinc metalloprotease ftsh | ALO56_01049 | P0AAI3 | Positive | 5574087 - 5576000 | 69379.7 |
| dihydropteroate synthase | ALO56_01050 | P0AC14 | Positive | 5576009 - 5576860 | 30037.6 |
| phosphoglucosamine mutase | ALO56_01051 | Q48E72 | Positive | 5576877 - 5578220 | 48090.2 |
| triosephosphate isomerase | ALO56_100029 | P95576 | Positive | 5578287 - 5579042 | 26107.3 |
| Trna-leu | Not Available | Not Available | Positive | 5579473 - 5579558 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5579655 - 5579731 | Not Available |
| ribosome maturation factor rimp | ALO56_01052 | Q87WQ3 | Positive | 5579844 - 5580320 | 17741.3 |
| transcription elongation factor nusa | ALO56_01053 | P0AFF8 | Positive | 5580380 - 5581861 | 54396.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









