Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | ALO56_01037 | O68564 | Negative | 5559531 - 5560055 | 19301.0 |
| fur | ALO56_01038 | Q03456 | Positive | 5560193 - 5560561 | 13818.5 |
| dna repair protein recn | ALO56_01039 | A5F379 | Negative | 5560638 - 5562311 | 61596.0 |
| protein grpe | ALO56_01040 | Q4ZNP6 | Positive | 5562582 - 5563145 | 20709.4 |
| chaperone protein dnak | ALO56_01041 | Q87WP0 | Positive | 5563247 - 5565163 | 68657.6 |
| chaperone protein dnaj | ALO56_01042 | Q87WP1 | Positive | 5565490 - 5566629 | 40558.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ALO56_01043 | Q52419 | Positive | 5566650 - 5567453 | 28140.0 |
| carbamoyl-phosphate synthase small chain | ALO56_01044 | Q87WP3 | Positive | 5567727 - 5568863 | 40701.3 |
| carbamoyl-phosphate synthase large chain | ALO56_01045 | Q87WP4 | Positive | 5569000 - 5572221 | 117539.0 |
| transcription elongation factor grea | ALO56_01046 | Q87WP5 | Positive | 5572218 - 5572694 | 17392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









