Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00280 | Not Available | Positive | 5547886 - 5548614 | 27635.1 |
| 3-ketoacyl- reductase | ALO56_00281 | P39333 | Positive | 5549311 - 5550060 | 25631.7 |
| Trna-ser | Not Available | Not Available | Positive | 5550261 - 5550350 | Not Available |
| sensor histidine kinase | ALO56_01700 | Q9I4F8 | Negative | 5551141 - 5552487 | 50271.8 |
| dna-binding response regulator phop | ALO56_01701 | Q9I4F9 | Negative | 5552484 - 5553161 | 25458.9 |
| uncharacterized protein | ALO56_01702 | Not Available | Negative | 5553195 - 5553539 | 12225.4 |
| dienelactone hydrolase | ALO56_01703 | P46209 | Positive | 5553700 - 5554488 | 28436.0 |
| 4'-phosphopantetheinyl transferase | ALO56_01704 | Not Available | Positive | 5554742 - 5555476 | 27121.3 |
| aldo/keto reductase | ALO56_01939 | Q40648 | Negative | 5556385 - 5557188 | 29885.3 |
| pyoverdine sidechain peptide synthetase iii, l-thr-l-ser component | ALO56_04758 | Not Available | Positive | 5557189 - 5559494 | 85320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









