Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble pyridine nucleotide transhydrogenase | ALO56_00270 | Q4ZV77 | Negative | 5529658 - 5531052 | 50718.5 |
| apbe-like lipoprotein | ALO56_00271 | A5F5Y3 | Negative | 5531188 - 5532309 | 41544.4 |
| citrate-proton symporter | ALO56_00272 | P07661 | Positive | 5532688 - 5533980 | 45985.9 |
| hypothetical protein | ALO56_00273 | Q52969 | Negative | 5534436 - 5535596 | 41311.5 |
| major facilitator transporter | ALO56_00274 | Not Available | Negative | 5535726 - 5536991 | 45647.9 |
| hypothetical protein | ALO56_04396 | Q02PG5 | Negative | 5537164 - 5538681 | 55412.3 |
| transcription-repair-coupling factor | ALO56_00276 | P30958 | Positive | 5538817 - 5542269 | 128973.0 |
| uncharacterized protein | ALO56_00277 | Not Available | Positive | 5542281 - 5542805 | 18965.8 |
| snf2-like protein | ALO56_00278 | P94593 | Positive | 5542881 - 5545625 | 103880.0 |
| uncharacterized protein | ALO56_00279 | Not Available | Positive | 5545691 - 5547886 | 80970.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









