Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04392 | B5FKT7 | Positive | 5520639 - 5521304 | 23792.8 |
| uncharacterized protein | ALO56_00262 | Not Available | Positive | 5521393 - 5521674 | 10531.5 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | ALO56_00263 | Q4ZV71 | Negative | 5521802 - 5522698 | 33362.8 |
| two component heavy metal response transcriptional regulator | ALO56_00264 | Q02540 | Positive | 5522808 - 5523488 | 25537.9 |
| copper sensor histidine kinase | ALO56_00265 | Q02541 | Positive | 5523485 - 5524846 | 49783.7 |
| lolc/e family lipoprotein releasing system, transmembrane protein | ALO56_00266 | Q9PEF2 | Negative | 5524899 - 5526143 | 44486.3 |
| lipoprotein-releasing system atp-binding protein lold | ALO56_00267 | Q48KI4 | Negative | 5526206 - 5526904 | 25060.3 |
| lipoprotein releasing system transmembrane protein lolc | ALO56_100527 | Not Available | Negative | 5526897 - 5528147 | 45573.3 |
| uncharacterized protein | ALO56_00268 | Not Available | Positive | 5528250 - 5528837 | 21765.9 |
| glycerophosphoryl diester phosphodiesterase | ALO56_00269 | P54527 | Positive | 5528893 - 5529615 | 26997.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









