Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00251 | Not Available | Negative | 5510207 - 5511307 | 41184.0 |
| rula protein | ALO56_00252 | Not Available | Negative | 5511487 - 5511897 | 14944.0 |
| glutamate carboxypeptidase | ALO56_00253 | Not Available | Negative | 5511995 - 5513236 | 43788.3 |
| outer membrane ferripyoverdine receptor | ALO56_00254 | P48632 | Positive | 5513503 - 5515674 | 79406.0 |
| uncharacterized protein | ALO56_00255 | Not Available | Negative | 5515749 - 5516228 | 17616.0 |
| transaldolase | ALO56_00256 | Q884H4 | Positive | 5516421 - 5517410 | 35771.3 |
| sulfate transporter/antisigma-factor antagonist stas | ALO56_00257 | Not Available | Negative | 5517489 - 5517974 | 17899.7 |
| response regulator | ALO56_00258 | Q9APD9 | Negative | 5517974 - 5519155 | 43137.2 |
| uncharacterized protein | ALO56_00259 | Not Available | Positive | 5519422 - 5519721 | 10849.8 |
| vacj family lipoprotein | ALO56_00260 | P76506 | Negative | 5519800 - 5520501 | 25549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









