Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bmp family protein | ALO56_02743 | Q2YKI6 | Positive | 497592 - 498686 | 39446.3 |
| 2og-fe oxygenase family oxidoreductase | ALO56_04918 | C8VK14 | Positive | 498761 - 499729 | 36296.9 |
| adenine deaminase | ALO56_02745 | Q889J2 | Positive | 499812 - 500765 | 36019.8 |
| regulatory protein arsr | ALO56_02746 | Not Available | Negative | 500948 - 501640 | 24585.9 |
| unknown protein sequence | ALO56_02747 | Not Available | Negative | 501891 - 502028 | 5353.69 |
| lysr family transcriptional regulator | ALO56_02748 | P45463 | Negative | 502096 - 503001 | 33441.4 |
| alcohol dehydrogenase, zinc-containing | ALO56_02749 | Q5HM44 | Positive | 503115 - 504128 | 36593.0 |
| heavy metal transport/detoxification protein | ALO56_02750 | Not Available | Negative | 505730 - 505921 | 6887.27 |
| copper-translocating p-type atpase | ALO56_02751 | Q2YWA3 | Positive | 506514 - 508721 | 77960.8 |
| transcriptional regulator | ALO56_02752 | Q9HV30 | Positive | 508718 - 509119 | 14801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









