Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_04596 | ALO56_04383 | Not Available | Negative | 5467013 - 5468173 | Not Available |
| uncharacterized protein | ALO56_00245 | Not Available | Negative | 5499180 - 5499698 | 18953.4 |
| pyocin, transcriptional repressor, ci/c2 family | ALO56_101077 | Not Available | Positive | 5500239 - 5501084 | 30433.2 |
| hypothetical protein | ALO56_101145 | Not Available | Positive | 5502121 - 5502297 | 6295.79 |
| uncharacterized protein | ALO56_00246 | Not Available | Positive | 5502294 - 5502869 | 21054.7 |
| uncharacterized protein | ALO56_00247 | Not Available | Positive | 5502878 - 5503162 | 10892.3 |
| uncharacterized protein | ALO56_00248 | Not Available | Positive | 5504048 - 5504470 | 15438.8 |
| hypothetical protein | ALO56_100588 | Not Available | Positive | 5505194 - 5505463 | 10064.5 |
| atpase aaa | ALO56_00249 | Not Available | Negative | 5505593 - 5508121 | 94677.5 |
| uncharacterized protein | ALO56_00250 | Not Available | Negative | 5509430 - 5509672 | 8432.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









