Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | ALO56_00169 | P76149 | Positive | 5452862 - 5454253 | 49847.5 |
| hypothetical protein | ALO56_200106 | Not Available | Negative | 5454479 - 5454658 | 6329.87 |
| peptide synthase | ALO56_04381 | Not Available | Negative | 5454944 - 5459287 | 159736.0 |
| thioesterase | ALO56_00213 | P14686 | Negative | 5459379 - 5460137 | 28224.0 |
| sigma factor pvds, controling pyoverdin biosynthesi | ALO56_101056 | Not Available | Positive | 5460452 - 5460997 | 20488.8 |
| uncharacterized protein | ALO56_00214 | Not Available | Negative | 5461067 - 5461594 | 19530.3 |
| sensor histidine kinase | ALO56_00215 | P54663 | Positive | 5461793 - 5462977 | 43042.7 |
| dna-binding response regulator, luxr family | ALO56_101236 | P94439 | Positive | 5462974 - 5463642 | 23669.5 |
| sensory box histidine kinase/response regulator | ALO56_100193 | Q9P896 | Positive | 5463633 - 5465966 | 85901.2 |
| universal stress family protein | ALO56_101340 | P42297 | Negative | 5466436 - 5466867 | 15209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









