Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5-related n-acetyltransferase | ALO56_101051 | Not Available | Negative | 5443213 - 5443371 | 6085.43 |
| uncharacterized protein | ALO56_00160 | Not Available | Negative | 5443792 - 5444082 | 10782.7 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ALO56_00161 | Q882G0 | Positive | 5444175 - 5445284 | 40459.3 |
| extracellular solute-binding protein | ALO56_00162 | Not Available | Positive | 5445583 - 5446614 | 37244.3 |
| spermidine/putrescine abc transporter permease | ALO56_00163 | Not Available | Positive | 5446617 - 5447555 | 33771.4 |
| spermidine/putrescine abc transporter permease | ALO56_00164 | D4GQ17 | Positive | 5447562 - 5448377 | 29797.6 |
| spermidine/putrescine abc transporter atp-binding protein | ALO56_00165 | Q1AS06 | Positive | 5448374 - 5449528 | 41730.1 |
| regulatory protein lysr | ALO56_00166 | Not Available | Negative | 5449758 - 5450675 | 34020.7 |
| tartrate dehydrogenase | ALO56_00167 | Q51945 | Positive | 5450776 - 5451867 | 40206.8 |
| lysr family transcriptional regulator | ALO56_00168 | P77309 | Negative | 5451881 - 5452771 | 32758.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









