Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | ALO56_04361 | Q1JUP4 | Negative | 5434211 - 5435641 | 50681.9 |
| unknown protein sequence | ALO56_00152 | Not Available | Negative | 5435722 - 5435850 | 4562.63 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO56_100118 | O07575 | Negative | 5435886 - 5436818 | 33682.4 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO56_00153 | Q9HTE3 | Negative | 5436819 - 5438006 | 42376.4 |
| uncharacterized protein | ALO56_00154 | Not Available | Positive | 5438197 - 5438787 | 21502.8 |
| 3-oxoadipate enol-lactonase | ALO56_00155 | Not Available | Positive | 5438820 - 5439653 | 29892.8 |
| aldehyde dehydrogenase | ALO56_04363 | Q6F9F7 | Positive | 5439566 - 5441131 | 55920.9 |
| flavin reductase-like protein | ALO56_00157 | B6CDL6 | Positive | 5441145 - 5441630 | 17227.9 |
| gntr family transcriptional regulator | ALO56_00158 | Not Available | Positive | 5441804 - 5442556 | 28042.0 |
| mutt/nudix family protein | ALO56_00159 | Not Available | Positive | 5442558 - 5443121 | 21185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









