Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| auxin-binding protein | ALO56_03977 | Not Available | Negative | 5420220 - 5420723 | 18372.8 |
| histidine kinase | ALO56_03978 | Not Available | Positive | 5421054 - 5422676 | 58316.6 |
| globin family protein | ALO56_01515 | Not Available | Negative | 5423100 - 5423522 | 15714.4 |
| uncharacterized protein | ALO56_01516 | Not Available | Negative | 5423522 - 5424385 | 30977.5 |
| hamp domain/ggdef domain/eal domain protein | ALO56_01517 | Not Available | Negative | 5424389 - 5426743 | 85042.8 |
| lon protease | ALO56_01518 | Q31FD3 | Positive | 5427601 - 5430018 | 89204.6 |
| shikimate 5-dehydrogenase | ALO56_00146 | P44774 | Negative | 5430430 - 5431242 | 28877.6 |
| uncharacterized protein | ALO56_00148 | Not Available | Positive | 5432007 - 5432189 | 6467.85 |
| uncharacterized protein | ALO56_00149 | Not Available | Negative | 5432389 - 5432949 | 21246.0 |
| d-alanyl-d-alanine endopeptidase | ALO56_00150 | P0AFI5 | Positive | 5433208 - 5434143 | 34065.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









