Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03967 | Not Available | Negative | 5403002 - 5403298 | 11125.3 |
| short-chain dehydrogenase/reductase sdr | ALO56_03968 | P37959 | Negative | 5403346 - 5404152 | 29672.1 |
| hydrophobe/amphiphile efflux-1 protein | ALO56_03969 | Not Available | Negative | 5406999 - 5410106 | 110978.0 |
| two component transcriptional regulator | ALO56_03970 | P52108 | Positive | 5411422 - 5412123 | 26364.9 |
| sensor kinase protein | ALO56_03971 | P18392 | Positive | 5412214 - 5413521 | 49020.5 |
| two component transcriptional regulator | ALO56_03972 | Not Available | Negative | 5414890 - 5415573 | 24762.8 |
| uncharacterized protein | ALO56_03973 | Not Available | Negative | 5415704 - 5416009 | 11084.2 |
| uncharacterized protein | ALO56_03974 | Not Available | Positive | 5416432 - 5416683 | 8681.26 |
| beta-glucosidase | ALO56_03975 | P27034 | Positive | 5416735 - 5419431 | 97728.0 |
| tetr family transcriptional regulator | ALO56_03976 | Not Available | Negative | 5419492 - 5420184 | 25877.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









