Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase small subunit | ALO56_00195 | Q06458 | Negative | 5379712 - 5380095 | 13928.4 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALO56_04372 | Not Available | Negative | 5380095 - 5382881 | 101536.0 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALO56_04503 | Not Available | Negative | 5383211 - 5383812 | 21498.0 |
| rubredoxin | ALO56_00775 | Q9HTK7 | Negative | 5383809 - 5383976 | 6190.39 |
| putative chorismate pyruvate-lyase | ALO56_00776 | Q48BQ6 | Positive | 5384154 - 5384723 | 21031.1 |
| 4-hydroxybenzoate octaprenyltransferase | ALO56_00777 | Q48BQ5 | Positive | 5384723 - 5385613 | 32830.5 |
| uncharacterized protein | ALO56_00778 | Not Available | Negative | 5385634 - 5386020 | 13649.0 |
| phosphate regulon transcriptional regulatory protein phob | ALO56_00779 | P23620 | Positive | 5386174 - 5386863 | 25612.9 |
| sensory box sensor histidine kinase phor | ALO56_00780 | P23621 | Positive | 5386961 - 5388247 | 48395.9 |
| transporter | ALO56_00781 | P54505 | Positive | 5388347 - 5389687 | 50131.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









