Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna -methyltransferase | ALO56_05184 | Q0BBL1 | Negative | 5369313 - 5369930 | 22496.0 |
| uncharacterized protein | ALO56_05185 | Not Available | Positive | 5369767 - 5370207 | 16638.9 |
| acyl-coa dehydrogenase domain-containing protein | ALO56_101326 | Q5LLW7 | Positive | 5370621 - 5371877 | 45609.5 |
| uncharacterized protein | ALO56_01213 | Q9I5W9 | Positive | 5372375 - 5372536 | 5898.73 |
| uncharacterized protein | ALO56_04594 | P34422 | Negative | 5372588 - 5374456 | 68097.4 |
| coenzyme pqq synthesis protein e | ALO56_01215 | Q4ZMC1 | Negative | 5374383 - 5375480 | 41408.4 |
| hypothetical protein | ALO56_200190 | Not Available | Positive | 5375725 - 5375838 | 3830.73 |
| hypothetical protein | ALO56_200030 | P27111 | Negative | 5376173 - 5377123 | 34542.9 |
| hypothetical protein | ALO56_200149 | P42308 | Positive | 5377220 - 5378512 | 45632.2 |
| hypothetical protein | ALO56_200107 | Not Available | Negative | 5378933 - 5379535 | 21970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









