Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole-4-carboxamide isomerase | ALO56_04128 | Q4ZLQ1 | Positive | 5360162 - 5360899 | 25906.4 |
| imidazole glycerol phosphate synthase subunit hisf | ALO56_04129 | Q48C81 | Positive | 5360935 - 5361705 | 27112.6 |
| abc-type amino acid transport, signal transduction system, periplasmic component/domain protein | ALO56_04130 | Not Available | Positive | 5361895 - 5362650 | 27883.7 |
| uncharacterized protein | ALO56_04131 | P37691 | Negative | 5362653 - 5363435 | 28594.9 |
| carboxyl-terminal protease | ALO56_04132 | Q44879 | Negative | 5363439 - 5364770 | 46568.9 |
| peptidase, m23 family | ALO56_05183 | P37690 | Negative | 5364804 - 5366243 | 53530.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | ALO56_100019 | Q48C87 | Negative | 5366268 - 5367857 | 57725.9 |
| rhodanese-like domain-containing protein | ALO56_04134 | P0AG29 | Positive | 5367946 - 5368359 | 14781.0 |
| glutaredoxin | ALO56_04135 | Q9HU55 | Positive | 5368356 - 5368613 | 9390.49 |
| protein-export protein secb | ALO56_04136 | Q48C90 | Positive | 5368652 - 5369143 | 18096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









