Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02733 | Not Available | Negative | 486402 - 486878 | 17516.2 |
| hypothetical protein | ALO56_02734 | Not Available | Positive | 486934 - 487074 | 5422.54 |
| short-chain dehydrogenase | ALO56_02735 | Not Available | Positive | 487317 - 488000 | 24227.2 |
| hydroxydechloroatrazine ethylaminohydrolase | ALO56_02736 | Q9I6Z0 | Positive | 488403 - 489758 | 48970.0 |
| hypothetical protein | ALO56_02737 | Not Available | Positive | 489849 - 492338 | 92808.8 |
| sodium/calcium exchanger membrane region | ALO56_04916 | P31801 | Negative | 492391 - 493581 | 42591.1 |
| iron dicitrate transport system, periplasmic iron-binding protein fecb | ALO56_02739 | P15028 | Positive | 493770 - 494690 | 32861.6 |
| iron-dicitrate transporter permease subunit | ALO56_02740 | P15030 | Positive | 494691 - 495680 | 33877.6 |
| iron dicitrate transport system, permease fecd | ALO56_02741 | O34832 | Positive | 495677 - 496645 | 33451.3 |
| ferrichrome abc transporter pvue | ALO56_02742 | P15031 | Positive | 496650 - 497441 | 28464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









