Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase | ALO56_03811 | Q59641 | Positive | 5320478 - 5321041 | 20200.2 |
| abc transporter atp-binding protein/permease | ALO56_03812 | Q57180 | Positive | 5321142 - 5322974 | 67527.2 |
| uncharacterized protein | ALO56_03813 | Not Available | Negative | 5323100 - 5324224 | 42352.1 |
| 3-oxoacyl- synthase iii | ALO56_03814 | Q9HYV7 | Negative | 5324370 - 5325491 | 40346.8 |
| atp-dependent helicase hrpa | ALO56_05122 | P43329 | Negative | 5325783 - 5329832 | 152624.0 |
| long-chain-fatty-acid--coa ligase | ALO56_03815 | Q8XDR6 | Negative | 5329845 - 5331536 | 62107.9 |
| long-chain-fatty-acid--coa ligase | ALO56_05125 | P63522 | Negative | 5331894 - 5333582 | 61595.1 |
| alpha/beta hydrolase | ALO56_03817 | A0QNZ7 | Positive | 5333789 - 5334733 | 34800.3 |
| acyl dehydratase | ALO56_03818 | Q2RQ36 | Positive | 5334778 - 5335248 | 17248.9 |
| uncharacterized protein | ALO56_03819 | Not Available | Negative | 5335535 - 5335693 | 6029.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









