Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase/exopolyphosphatase | ALO56_03802 | Not Available | Negative | 5313589 - 5314659 | 39694.5 |
| hypothetical protein | ALO56_100750 | Not Available | Negative | 5314628 - 5315047 | 15120.5 |
| uncharacterized protein | ALO56_03803 | Not Available | Positive | 5315450 - 5315689 | 8921.59 |
| uncharacterized protein | ALO56_03804 | Not Available | Positive | 5315703 - 5316017 | 11982.0 |
| uncharacterized protein | ALO56_03805 | P40893 | Negative | 5316045 - 5316617 | 21046.1 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO56_03806 | P05406 | Positive | 5316730 - 5317464 | 25921.1 |
| fmn-dependent nadh-azoreductase | ALO56_03807 | Q4KGG0 | Negative | 5317492 - 5318112 | 22483.8 |
| uncharacterized protein | ALO56_03808 | Not Available | Negative | 5318232 - 5318546 | 11446.1 |
| lysr family transcriptional regulator | ALO56_03809 | P48271 | Positive | 5318614 - 5319537 | 33697.5 |
| alpha/beta fold family hydrolase | ALO56_03810 | Q6F9F4 | Positive | 5319552 - 5320340 | 29713.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









