Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component regulator system response regulator pmra | ALO56_03794 | Q9HV32 | Positive | 5303140 - 5303802 | 24717.8 |
| sensor y histidine kinase qsec | ALO56_100577 | Q9HV31 | Positive | 5303739 - 5305166 | 52921.7 |
| membrane protein | ALO56_100430 | O68826 | Negative | 5305173 - 5306192 | 37488.9 |
| uncharacterized protein | ALO56_03795 | Not Available | Positive | 5306298 - 5306786 | 18045.0 |
| uncharacterized protein | ALO56_05120 | Q01609 | Negative | 5306837 - 5307895 | 39182.0 |
| major facilitator transporter | ALO56_03797 | Q01602 | Negative | 5307911 - 5309110 | 41992.7 |
| regulatory protein lysr | ALO56_03798 | Q01610 | Positive | 5309248 - 5310141 | 33045.6 |
| uncharacterized protein | ALO56_03799 | Not Available | Negative | 5310146 - 5311264 | 40785.2 |
| mscs mechanosensitive ion channel | ALO56_03800 | P0AAT4 | Positive | 5311428 - 5312687 | 47143.1 |
| exonuclease | ALO56_03801 | Not Available | Positive | 5312883 - 5313506 | 23544.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









