Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03784 | Not Available | Positive | 5293807 - 5293995 | 6439.82 |
| uncharacterized protein | ALO56_03785 | Not Available | Positive | 5294165 - 5294677 | 18849.3 |
| uncharacterized protein | ALO56_03786 | Not Available | Positive | 5294825 - 5295553 | 26420.8 |
| lipoprotein | ALO56_03787 | Not Available | Positive | 5295637 - 5296509 | 33863.4 |
| uncharacterized protein | ALO56_03788 | Not Available | Negative | 5296570 - 5296944 | 13468.4 |
| atp-dependent rna helicase srmb | ALO56_03789 | P21507 | Negative | 5297243 - 5298604 | 49656.6 |
| uncharacterized protein | ALO56_03790 | Not Available | Positive | 5298843 - 5299520 | 24294.0 |
| long-chain-fatty-acid-coa ligase | ALO56_03791 | O06417 | Positive | 5299510 - 5301003 | 54547.2 |
| uncharacterized protein | ALO56_03792 | Not Available | Positive | 5301000 - 5301689 | 25710.7 |
| uncharacterized protein | ALO56_03793 | Not Available | Positive | 5302482 - 5303129 | 23781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









