Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_100234 | Not Available | Negative | 5279361 - 5279702 | 12719.1 |
| nadph-dependent fmn reductase | ALO56_02291 | Q93T20 | Positive | 5279762 - 5280346 | 20720.7 |
| uncharacterized protein | ALO56_02292 | Not Available | Positive | 5280447 - 5285708 | 194939.0 |
| acyl-coa dehydrogenase | ALO56_04849 | P45857 | Negative | 5285782 - 5286933 | 41847.2 |
| enoly-coa hydratase/isomerase family protein | ALO56_02294 | Q28FR6 | Negative | 5286937 - 5288034 | 40490.0 |
| transporter | ALO56_02295 | Not Available | Positive | 5288321 - 5290000 | 60166.9 |
| dsba oxidoreductase | ALO56_100359 | Not Available | Positive | 5289997 - 5291190 | 42893.0 |
| uncharacterized protein | ALO56_03781 | Not Available | Negative | 5291400 - 5291813 | 14685.4 |
| dsba oxidoreductase | ALO56_03782 | P39598 | Positive | 5291955 - 5292587 | 23910.7 |
| uncharacterized protein | ALO56_05119 | O06747 | Negative | 5292630 - 5293472 | 31229.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









