Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALO56_02282 | P33915 | Negative | 5268080 - 5269099 | 37898.7 |
| abc transporter permease | ALO56_02283 | Not Available | Negative | 5269101 - 5270174 | 39321.7 |
| extracellular solute-binding protein | ALO56_04848 | Not Available | Negative | 5270176 - 5272146 | 73582.3 |
| abc transporter substrate-binding protein | ALO56_02285 | Q8YC41 | Negative | 5272029 - 5273936 | 72244.1 |
| membrane-bound lytic murein transglycosylase d precursor | ALO56_100223 | P0AEZ8 | Negative | 5274045 - 5275646 | 59485.9 |
| hydroxyacylglutathione hydrolase | ALO56_02286 | Q48KX8 | Negative | 5275746 - 5276525 | 28754.2 |
| uncharacterized protein | ALO56_02287 | Not Available | Positive | 5276607 - 5277365 | 27868.8 |
| ribonuclease h | ALO56_02288 | Q4ZVL1 | Positive | 5277418 - 5277870 | 16764.9 |
| dna polymerase iii subunit epsilon | ALO56_02289 | P03007 | Positive | 5277969 - 5278748 | 28124.2 |
| acetyltransferase | ALO56_02290 | P13018 | Positive | 5278771 - 5279328 | 21070.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









