Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | ALO56_100668 | Not Available | Positive | 5245696 - 5246580 | 32778.6 |
| sigma-54 dependent transcriptional regulator | ALO56_02267 | P28614 | Negative | 5246868 - 5248727 | 68571.2 |
| abc transporter | ALO56_02268 | Q13TV1 | Positive | 5249023 - 5250117 | 40596.0 |
| abc transporter atp-binding protein | ALO56_02269 | Q7NRX5 | Positive | 5250117 - 5251226 | 41420.1 |
| binding-protein dependent transport system inner membrane protein | ALO56_100047 | Q8FVS6 | Positive | 5251223 - 5252092 | 32677.3 |
| binding-protein-dependent transport system inner membrane protein | ALO56_02270 | Q9K489 | Positive | 5252103 - 5252903 | 29825.1 |
| uncharacterized protein | ALO56_02271 | Not Available | Positive | 5252915 - 5253187 | 10029.5 |
| abc transporter periplasmic substrate-binding protein | ALO56_02272 | Not Available | Positive | 5253272 - 5255044 | 65591.5 |
| bifunctional protein fold | ALO56_02273 | Q4ZVN1 | Negative | 5255110 - 5255964 | 30247.0 |
| Trna-arg | Not Available | Not Available | Positive | 5256260 - 5256336 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









