Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs sugar transporter | ALO56_00773 | P39398 | Positive | 473558 - 474928 | 49409.5 |
| methylmalonate-semialdehyde dehydrogenase | ALO56_02725 | Not Available | Negative | 475270 - 476775 | 54167.1 |
| beta alanine--pyruvate transaminase | ALO56_02726 | P28269 | Negative | 476845 - 478191 | 48649.4 |
| lysr family transcriptional regulator | ALO56_02727 | Not Available | Positive | 478304 - 479224 | 33774.7 |
| xanthine/uracil permease | ALO56_100328 | P0AGN1 | Positive | 479355 - 480818 | 51059.6 |
| tetr family transcriptional regulator | ALO56_02728 | P0ACU3 | Positive | 480843 - 481565 | 26880.4 |
| thymidylate synthase | ALO56_02729 | P32438 | Positive | 481598 - 482191 | 21271.3 |
| abc transporter atp-binding protein | ALO56_04915 | Not Available | Positive | 482651 - 484267 | 57904.2 |
| abc transporter permease | ALO56_02731 | D4GPW2 | Positive | 484279 - 485379 | 39378.6 |
| abc transporter permease | ALO56_02732 | Not Available | Positive | 485379 - 486305 | 32572.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









